Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.3□□□□□ -0.28
HMGA2P52926 ELK1P1-201ENST00000485699 580 ntBASIC13.3□□□□□ -0.28
HMGA2P52926 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.3□□□□□ -0.28
HMGA2P52926 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.3□□□□□ -0.28
HMGA2P52926 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 AC106820.3-201ENST00000561653 397 ntBASIC13.3□□□□□ -0.28
HMGA2P52926 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.3□□□□□ -0.28
HMGA2P52926 AC132938.4-201ENST00000623835 848 ntBASIC13.3□□□□□ -0.28
HMGA2P52926 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HMGA2P52926 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
HMGA2P52926 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.29□□□□□ -0.28
HMGA2P52926 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.29□□□□□ -0.28
HMGA2P52926 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.29□□□□□ -0.28
HMGA2P52926 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HMGA2P52926 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
HMGA2P52926 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HMGA2P52926 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HMGA2P52926 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 AC012441.1-201ENST00000446669 685 ntBASIC13.29□□□□□ -0.28
HMGA2P52926 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.29□□□□□ -0.28
HMGA2P52926 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.29□□□□□ -0.28
HMGA2P52926 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HMGA2P52926 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.29□□□□□ -0.28
HMGA2P52926 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.29□□□□□ -0.28
HMGA2P52926 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
HMGA2P52926 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.29□□□□□ -0.28
HMGA2P52926 BEND3P3-201ENST00000611030 2440 ntBASIC13.29□□□□□ -0.28
HMGA2P52926 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HMGA2P52926 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms