Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF140P52738 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.46□□□□□ -0.09
ZNF140P52738 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ZNF140P52738 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ZNF140P52738 OR2I1P-209ENST00000641730 5365 ntBASIC14.46□□□□□ -0.09
ZNF140P52738 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
ZNF140P52738 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF140P52738 AC004899.1-201ENST00000424687 1714 ntBASIC14.46□□□□□ -0.1
ZNF140P52738 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF140P52738 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF140P52738 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF140P52738 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
ZNF140P52738 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
ZNF140P52738 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.46□□□□□ -0.1
ZNF140P52738 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF140P52738 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF140P52738 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ZNF140P52738 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 AC022217.1-201ENST00000521069 738 ntBASIC14.45□□□□□ -0.1
ZNF140P52738 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.45□□□□□ -0.1
ZNF140P52738 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.45□□□□□ -0.1
ZNF140P52738 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.45□□□□□ -0.1
ZNF140P52738 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.45□□□□□ -0.1
ZNF140P52738 AL008721.1-201ENST00000609964 604 ntBASIC14.45□□□□□ -0.1
ZNF140P52738 AC090386.2-201ENST00000623010 1039 ntBASIC14.45□□□□□ -0.1
ZNF140P52738 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
ZNF140P52738 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF140P52738 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF140P52738 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ZNF140P52738 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ZNF140P52738 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF140P52738 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF140P52738 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF140P52738 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF140P52738 AC018629.1-201ENST00000623381 1736 ntBASIC14.44□□□□□ -0.1
ZNF140P52738 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF140P52738 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF140P52738 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF140P52738 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF140P52738 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF140P52738 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF140P52738 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ZNF140P52738 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF140P52738 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF140P52738 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ZNF140P52738 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.44□□□□□ -0.1
ZNF140P52738 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF140P52738 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF140P52738 PGAM1P5-201ENST00000548011 764 ntBASIC14.44□□□□□ -0.1
ZNF140P52738 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF140P52738 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF140P52738 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF140P52738 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.44□□□□□ -0.1
ZNF140P52738 AC068587.8-201ENST00000641239 219 ntBASIC14.44□□□□□ -0.1
ZNF140P52738 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
ZNF140P52738 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms