Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCNKBP51801 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLCNKBP51801 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLCNKBP51801 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLCNKBP51801 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCNKBP51801 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCNKBP51801 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCNKBP51801 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCNKBP51801 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCNKBP51801 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLCNKBP51801 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCNKBP51801 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLCNKBP51801 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.48■□□□□ 0.07
CLCNKBP51801 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLCNKBP51801 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCNKBP51801 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.48■□□□□ 0.07
CLCNKBP51801 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CLCNKBP51801 PCDHA3-202ENST00000532566 4594 ntBASIC15.48■□□□□ 0.07
CLCNKBP51801 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CLCNKBP51801 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCNKBP51801 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CLCNKBP51801 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCNKBP51801 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCNKBP51801 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CLCNKBP51801 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CLCNKBP51801 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCNKBP51801 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.47■□□□□ 0.07
CLCNKBP51801 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.47■□□□□ 0.07
CLCNKBP51801 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCNKBP51801 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.47■□□□□ 0.07
CLCNKBP51801 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 KRT8P31-201ENST00000504812 1408 ntBASIC15.47■□□□□ 0.07
CLCNKBP51801 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.47■□□□□ 0.07
CLCNKBP51801 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLCNKBP51801 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CLCNKBP51801 AC140658.4-201ENST00000561990 352 ntBASIC15.47■□□□□ 0.07
CLCNKBP51801 MIR4722-201ENST00000578292 60 ntBASIC15.47■□□□□ 0.07
CLCNKBP51801 MIR6074-201ENST00000612054 107 ntBASIC15.47■□□□□ 0.07
CLCNKBP51801 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCNKBP51801 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCNKBP51801 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.47■□□□□ 0.07
CLCNKBP51801 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLCNKBP51801 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CLCNKBP51801 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLCNKBP51801 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.47■□□□□ 0.07
CLCNKBP51801 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCNKBP51801 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCNKBP51801 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCNKBP51801 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 KRT17P5-201ENST00000332088 839 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 MIR557-201ENST00000385239 98 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 FXNP2-201ENST00000411625 547 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 AC069218.1-201ENST00000435269 762 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 DUTP3-201ENST00000450025 415 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 RPS2P36-201ENST00000456516 831 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 TPT1P11-201ENST00000458482 498 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCNKBP51801 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.46■□□□□ 0.07
CLCNKBP51801 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCNKBP51801 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.46■□□□□ 0.07
CLCNKBP51801 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCNKBP51801 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCNKBP51801 SIGLEC18P-201ENST00000602271 909 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 AC103810.10-201ENST00000606504 343 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 AP001267.2-201ENST00000532619 2086 ntBASIC15.46■□□□□ 0.07
CLCNKBP51801 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CLCNKBP51801 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
CLCNKBP51801 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLCNKBP51801 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.46■□□□□ 0.07
CLCNKBP51801 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CLCNKBP51801 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms