Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC6A12P48065 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC6A12P48065 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC6A12P48065 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.02□□□□□ -0.16
SLC6A12P48065 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC6A12P48065 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC6A12P48065 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC6A12P48065 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC6A12P48065 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC6A12P48065 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
SLC6A12P48065 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC6A12P48065 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.02□□□□□ -0.16
SLC6A12P48065 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC6A12P48065 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC6A12P48065 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC6A12P48065 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC6A12P48065 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC6A12P48065 FAM21FP-201ENST00000426241 1131 ntBASIC14.02□□□□□ -0.17
SLC6A12P48065 MTX1P1-201ENST00000440904 838 ntBASIC14.02□□□□□ -0.17
SLC6A12P48065 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 RPSAP36-202ENST00000494591 1261 ntBASIC14.02□□□□□ -0.17
SLC6A12P48065 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC6A12P48065 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 IGHV3-71-201ENST00000523324 359 ntBASIC14.02□□□□□ -0.17
SLC6A12P48065 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC6A12P48065 AC124068.2-201ENST00000569473 1109 ntBASIC14.02□□□□□ -0.17
SLC6A12P48065 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC6A12P48065 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC6A12P48065 AC010328.2-201ENST00000597698 1111 ntBASIC14.02□□□□□ -0.17
SLC6A12P48065 AC021016.3-201ENST00000608367 477 ntBASIC14.02□□□□□ -0.17
SLC6A12P48065 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC6A12P48065 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC6A12P48065 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC6A12P48065 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC6A12P48065 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC6A12P48065 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SLC6A12P48065 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC6A12P48065 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC6A12P48065 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SLC6A12P48065 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC6A12P48065 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC6A12P48065 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC6A12P48065 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC6A12P48065 Z93015.1-201ENST00000451718 390 ntBASIC14.01□□□□□ -0.17
SLC6A12P48065 BNIP3P42-201ENST00000454982 569 ntBASIC14.01□□□□□ -0.17
SLC6A12P48065 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC6A12P48065 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SLC6A12P48065 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC6A12P48065 AC005730.2-201ENST00000564549 1184 ntBASIC14.01□□□□□ -0.17
SLC6A12P48065 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC6A12P48065 BNIP3P29-201ENST00000598302 571 ntBASIC14.01□□□□□ -0.17
SLC6A12P48065 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC6A12P48065 BAP1-211ENST00000615113 489 ntBASIC14.01□□□□□ -0.17
SLC6A12P48065 AC011447.5-201ENST00000616168 564 ntBASIC14.01□□□□□ -0.17
SLC6A12P48065 AC133540.1-201ENST00000620845 1019 ntBASIC14.01□□□□□ -0.17
SLC6A12P48065 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 AC090386.2-201ENST00000623010 1039 ntBASIC14.01□□□□□ -0.17
SLC6A12P48065 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.01□□□□□ -0.17
SLC6A12P48065 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC6A12P48065 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms