Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NKX2-1P43699 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NKX2-1P43699 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 MRPL37P1-201ENST00000592451 1337 ntBASIC12.02□□□□□ -0.49
NKX2-1P43699 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.02□□□□□ -0.49
NKX2-1P43699 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.02□□□□□ -0.49
NKX2-1P43699 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NKX2-1P43699 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NKX2-1P43699 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.02□□□□□ -0.49
NKX2-1P43699 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.02□□□□□ -0.49
NKX2-1P43699 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.02□□□□□ -0.49
NKX2-1P43699 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
NKX2-1P43699 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.02□□□□□ -0.49
NKX2-1P43699 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NKX2-1P43699 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.02□□□□□ -0.49
NKX2-1P43699 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 AL138799.1-201ENST00000448213 1675 ntBASIC12.01□□□□□ -0.49
NKX2-1P43699 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NKX2-1P43699 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 AC211486.1-202ENST00000416371 468 ntBASIC12.01□□□□□ -0.49
NKX2-1P43699 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.01□□□□□ -0.49
NKX2-1P43699 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.01□□□□□ -0.49
NKX2-1P43699 AC211476.1-201ENST00000503899 468 ntBASIC12.01□□□□□ -0.49
NKX2-1P43699 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.01□□□□□ -0.49
NKX2-1P43699 AC092865.5-201ENST00000545435 363 ntBASIC12.01□□□□□ -0.49
NKX2-1P43699 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 AC093520.2-201ENST00000561830 333 ntBASIC12.01□□□□□ -0.49
NKX2-1P43699 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 TUBB8P4-201ENST00000511806 1324 ntBASIC12.01□□□□□ -0.49
NKX2-1P43699 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.01□□□□□ -0.49
NKX2-1P43699 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
NKX2-1P43699 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX2-1P43699 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX2-1P43699 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX2-1P43699 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
NKX2-1P43699 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX2-1P43699 AL122018.1-201ENST00000446607 2310 ntBASIC12□□□□□ -0.49
NKX2-1P43699 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
NKX2-1P43699 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms