Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
PRPHP41219 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRPHP41219 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPHP41219 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PRPHP41219 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPHP41219 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.46■□□□□ 0.23
PRPHP41219 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPHP41219 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.46■□□□□ 0.23
PRPHP41219 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPHP41219 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRPHP41219 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRPHP41219 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRPHP41219 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.46■□□□□ 0.23
PRPHP41219 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRPHP41219 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRPHP41219 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.46■□□□□ 0.22
PRPHP41219 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRPHP41219 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 TUBB8P4-201ENST00000511806 1324 ntBASIC16.45■□□□□ 0.22
PRPHP41219 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.45■□□□□ 0.22
PRPHP41219 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.45■□□□□ 0.22
PRPHP41219 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PRPHP41219 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 MTX1P1-201ENST00000440904 838 ntBASIC16.45■□□□□ 0.22
PRPHP41219 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PRPHP41219 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PRPHP41219 LINC01230-201ENST00000625222 3017 ntBASIC16.45■□□□□ 0.22
PRPHP41219 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.45■□□□□ 0.22
PRPHP41219 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRPHP41219 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.44■□□□□ 0.22
PRPHP41219 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.44■□□□□ 0.22
PRPHP41219 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.44■□□□□ 0.22
PRPHP41219 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRPHP41219 CICP16-201ENST00000502609 2813 ntBASIC16.44■□□□□ 0.22
PRPHP41219 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRPHP41219 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.44■□□□□ 0.22
PRPHP41219 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PRPHP41219 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PRPHP41219 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.44■□□□□ 0.22
PRPHP41219 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.44■□□□□ 0.22
PRPHP41219 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.44■□□□□ 0.22
PRPHP41219 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRPHP41219 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 FAM86HP-204ENST00000513466 959 ntBASIC16.44■□□□□ 0.22
PRPHP41219 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.44■□□□□ 0.22
PRPHP41219 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.44■□□□□ 0.22
PRPHP41219 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 RN7SL560P-201ENST00000577943 264 ntBASIC16.44■□□□□ 0.22
PRPHP41219 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.44■□□□□ 0.22
PRPHP41219 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.44■□□□□ 0.22
PRPHP41219 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.44■□□□□ 0.22
PRPHP41219 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRPHP41219 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms