Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.45□□□□□ -0.26
SHC1P29353 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SHC1P29353 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.44□□□□□ -0.26
SHC1P29353 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.44□□□□□ -0.26
SHC1P29353 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SHC1P29353 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.44□□□□□ -0.26
SHC1P29353 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 KRT8P4-201ENST00000509735 1454 ntBASIC13.44□□□□□ -0.26
SHC1P29353 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 CICP20-201ENST00000443330 2801 ntBASIC13.44□□□□□ -0.26
SHC1P29353 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.44□□□□□ -0.26
SHC1P29353 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SHC1P29353 AC004945.1-201ENST00000416738 983 ntBASIC13.44□□□□□ -0.26
SHC1P29353 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.44□□□□□ -0.26
SHC1P29353 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.44□□□□□ -0.26
SHC1P29353 CNN2P10-201ENST00000443067 918 ntBASIC13.44□□□□□ -0.26
SHC1P29353 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.44□□□□□ -0.26
SHC1P29353 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.44□□□□□ -0.26
SHC1P29353 RN7SL713P-201ENST00000582127 302 ntBASIC13.44□□□□□ -0.26
SHC1P29353 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.44□□□□□ -0.26
SHC1P29353 AP000593.2-201ENST00000542775 1433 ntBASIC13.44□□□□□ -0.26
SHC1P29353 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SHC1P29353 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.44□□□□□ -0.26
SHC1P29353 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.44□□□□□ -0.26
SHC1P29353 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHC1P29353 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.43□□□□□ -0.26
SHC1P29353 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
SHC1P29353 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
SHC1P29353 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.43□□□□□ -0.26
SHC1P29353 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
SHC1P29353 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms