Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.87□□□□□ -0.19
PTPN6P29350 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.87□□□□□ -0.19
PTPN6P29350 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 AP005482.1-201ENST00000563722 1273 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.87□□□□□ -0.19
PTPN6P29350 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 AL008721.1-201ENST00000609964 604 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 AC244669.2-201ENST00000612320 853 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 AL354718.3-201ENST00000616414 581 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 CR382287.1-201ENST00000623954 586 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 AP000593.2-201ENST00000542775 1433 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.86□□□□□ -0.19
PTPN6P29350 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PTPN6P29350 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 RN7SKP175-201ENST00000408472 289 ntBASIC13.86□□□□□ -0.19
PTPN6P29350 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.86□□□□□ -0.19
PTPN6P29350 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.86□□□□□ -0.19
PTPN6P29350 AP000812.2-201ENST00000538934 718 ntBASIC13.86□□□□□ -0.19
PTPN6P29350 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PTPN6P29350 KRT90P-201ENST00000549264 1064 ntBASIC13.86□□□□□ -0.19
PTPN6P29350 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.86□□□□□ -0.19
PTPN6P29350 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.86□□□□□ -0.19
PTPN6P29350 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 FKBP4P6-201ENST00000457486 1332 ntBASIC13.86□□□□□ -0.19
PTPN6P29350 TUBB8P4-201ENST00000511806 1324 ntBASIC13.86□□□□□ -0.19
PTPN6P29350 AC064801.2-201ENST00000625052 1303 ntBASIC13.86□□□□□ -0.19
PTPN6P29350 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.86□□□□□ -0.19
PTPN6P29350 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PTPN6P29350 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PTPN6P29350 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTPN6P29350 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PTPN6P29350 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms