Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.49□□□□□ -0.09
VARSP26640 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.49□□□□□ -0.09
VARSP26640 AL355864.2-201ENST00000447420 863 ntBASIC14.49□□□□□ -0.09
VARSP26640 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.49□□□□□ -0.09
VARSP26640 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
VARSP26640 CROCCP4-201ENST00000457096 498 ntBASIC14.49□□□□□ -0.09
VARSP26640 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.49□□□□□ -0.09
VARSP26640 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.49□□□□□ -0.09
VARSP26640 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.49□□□□□ -0.09
VARSP26640 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
VARSP26640 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 PDIA3P1-201ENST00000471856 1510 ntBASIC14.49□□□□□ -0.09
VARSP26640 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.49□□□□□ -0.09
VARSP26640 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VARSP26640 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VARSP26640 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.48□□□□□ -0.09
VARSP26640 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.48□□□□□ -0.09
VARSP26640 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 BCYRN1-201ENST00000418539 200 ntBASIC14.48□□□□□ -0.09
VARSP26640 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.48□□□□□ -0.09
VARSP26640 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.48□□□□□ -0.09
VARSP26640 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.48□□□□□ -0.09
VARSP26640 MIR4538-201ENST00000581377 78 ntBASIC14.48□□□□□ -0.09
VARSP26640 AL603764.1-201ENST00000636452 321 ntBASIC14.48□□□□□ -0.09
VARSP26640 AC068587.10-201ENST00000641210 219 ntBASIC14.48□□□□□ -0.09
VARSP26640 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
VARSP26640 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.48□□□□□ -0.09
VARSP26640 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VARSP26640 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 AL138709.1-201ENST00000614840 1693 ntBASIC14.48□□□□□ -0.09
VARSP26640 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.48□□□□□ -0.09
VARSP26640 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VARSP26640 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
VARSP26640 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.48□□□□□ -0.09
VARSP26640 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VARSP26640 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VARSP26640 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VARSP26640 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms