Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ATF1P18846 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ATF1P18846 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.87□□□□□ -0.35
ATF1P18846 AC007969.1-201ENST00000433675 447 ntBASIC12.87□□□□□ -0.35
ATF1P18846 GIMAP3P-201ENST00000495150 836 ntBASIC12.87□□□□□ -0.35
ATF1P18846 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.87□□□□□ -0.35
ATF1P18846 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
ATF1P18846 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.87□□□□□ -0.35
ATF1P18846 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 AC005498.2-205ENST00000593218 784 ntBASIC12.87□□□□□ -0.35
ATF1P18846 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 LRRC59-203ENST00000576448 1531 ntBASIC12.87□□□□□ -0.35
ATF1P18846 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ATF1P18846 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 SALL4P5-201ENST00000419001 1760 ntBASIC12.86□□□□□ -0.35
ATF1P18846 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ATF1P18846 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ATF1P18846 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ATF1P18846 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.86□□□□□ -0.35
ATF1P18846 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 TLE1P1-201ENST00000422965 589 ntBASIC12.86□□□□□ -0.35
ATF1P18846 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.86□□□□□ -0.35
ATF1P18846 EIF3FP3-201ENST00000434851 1086 ntBASIC12.86□□□□□ -0.35
ATF1P18846 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
ATF1P18846 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.86□□□□□ -0.35
ATF1P18846 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.86□□□□□ -0.35
ATF1P18846 AC092552.1-201ENST00000547243 906 ntBASIC12.86□□□□□ -0.35
ATF1P18846 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.86□□□□□ -0.35
ATF1P18846 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ATF1P18846 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.86□□□□□ -0.35
ATF1P18846 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ATF1P18846 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ATF1P18846 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.86□□□□□ -0.35
ATF1P18846 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ATF1P18846 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATF1P18846 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms