Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFTRP13569 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CFTRP13569 KRT19P4-201ENST00000443208 943 ntBASIC23.98■■□□□ 1.43
CFTRP13569 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CFTRP13569 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC23.98■■□□□ 1.43
CFTRP13569 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC23.98■■□□□ 1.43
CFTRP13569 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC23.98■■□□□ 1.43
CFTRP13569 RN7SL440P-201ENST00000577855 343 ntBASIC23.98■■□□□ 1.43
CFTRP13569 AC106782.5-201ENST00000616011 337 ntBASIC23.98■■□□□ 1.43
CFTRP13569 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFTRP13569 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CFTRP13569 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CFTRP13569 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC23.98■■□□□ 1.43
CFTRP13569 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC23.98■■□□□ 1.43
CFTRP13569 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
CFTRP13569 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC23.97■■□□□ 1.43
CFTRP13569 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC23.97■■□□□ 1.43
CFTRP13569 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CFTRP13569 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CFTRP13569 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC23.97■■□□□ 1.43
CFTRP13569 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
CFTRP13569 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC23.97■■□□□ 1.43
CFTRP13569 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 RN7SKP212-201ENST00000410851 328 ntBASIC23.97■■□□□ 1.43
CFTRP13569 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC23.97■■□□□ 1.43
CFTRP13569 AC093700.1-201ENST00000503348 717 ntBASIC23.97■■□□□ 1.43
CFTRP13569 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC23.97■■□□□ 1.43
CFTRP13569 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC23.97■■□□□ 1.43
CFTRP13569 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC23.97■■□□□ 1.43
CFTRP13569 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC23.97■■□□□ 1.43
CFTRP13569 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC23.97■■□□□ 1.43
CFTRP13569 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
CFTRP13569 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CFTRP13569 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CFTRP13569 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 OLA1P2-201ENST00000395519 1264 ntBASIC23.96■■□□□ 1.43
CFTRP13569 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC23.96■■□□□ 1.43
CFTRP13569 AC041040.1-201ENST00000425197 460 ntBASIC23.96■■□□□ 1.43
CFTRP13569 CD37-203ENST00000426897 1204 ntTSL 2 BASIC23.96■■□□□ 1.43
CFTRP13569 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC23.96■■□□□ 1.43
CFTRP13569 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC23.96■■□□□ 1.43
CFTRP13569 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC23.96■■□□□ 1.43
CFTRP13569 MIR6125-201ENST00000618986 96 ntBASIC23.96■■□□□ 1.43
CFTRP13569 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
CFTRP13569 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC23.96■■□□□ 1.43
CFTRP13569 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CFTRP13569 WARS-203ENST00000358655 2466 ntTSL 2 BASIC23.96■■□□□ 1.43
CFTRP13569 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC23.96■■□□□ 1.43
CFTRP13569 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CFTRP13569 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CFTRP13569 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CFTRP13569 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC23.95■■□□□ 1.42
CFTRP13569 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC23.95■■□□□ 1.42
CFTRP13569 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC23.95■■□□□ 1.42
CFTRP13569 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC23.95■■□□□ 1.42
CFTRP13569 AC233724.9-201ENST00000511694 407 ntBASIC23.95■■□□□ 1.42
CFTRP13569 BX322562.1-201ENST00000617004 561 ntBASIC23.95■■□□□ 1.42
CFTRP13569 NF1P11-201ENST00000621292 1282 ntBASIC23.95■■□□□ 1.42
CFTRP13569 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC23.95■■□□□ 1.42
CFTRP13569 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CFTRP13569 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CFTRP13569 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC23.95■■□□□ 1.42
CFTRP13569 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CFTRP13569 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC23.95■■□□□ 1.42
CFTRP13569 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC23.95■■□□□ 1.42
CFTRP13569 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CFTRP13569 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CFTRP13569 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC23.94■■□□□ 1.42
CFTRP13569 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC23.94■■□□□ 1.42
CFTRP13569 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC23.94■■□□□ 1.42
CFTRP13569 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC23.94■■□□□ 1.42
CFTRP13569 AC015818.1-201ENST00000451011 244 ntBASIC23.94■■□□□ 1.42
CFTRP13569 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms