Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DEFA4P12838 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DEFA4P12838 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.98□□□□□ -0.49
DEFA4P12838 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.98□□□□□ -0.49
DEFA4P12838 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.98□□□□□ -0.49
DEFA4P12838 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.98□□□□□ -0.49
DEFA4P12838 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.98□□□□□ -0.49
DEFA4P12838 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
DEFA4P12838 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.98□□□□□ -0.49
DEFA4P12838 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 PCDHA5-203ENST00000614258 4248 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 AC093525.8-201ENST00000624099 1342 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.97□□□□□ -0.49
DEFA4P12838 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 TSPY16P-201ENST00000449843 468 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.97□□□□□ -0.49
DEFA4P12838 AC123567.1-201ENST00000548294 1261 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.97□□□□□ -0.49
DEFA4P12838 AC120045.2-201ENST00000567334 178 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 AC027796.2-201ENST00000575326 344 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.97□□□□□ -0.49
DEFA4P12838 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.97□□□□□ -0.49
DEFA4P12838 AC099568.2-201ENST00000609194 695 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 AJ011932.1-201ENST00000621707 465 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.97□□□□□ -0.49
DEFA4P12838 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 AC027612.1-201ENST00000445234 2395 ntBASIC11.97□□□□□ -0.49
DEFA4P12838 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.97□□□□□ -0.49
DEFA4P12838 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DEFA4P12838 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
DEFA4P12838 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.96□□□□□ -0.49
DEFA4P12838 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
DEFA4P12838 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.96□□□□□ -0.49
DEFA4P12838 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
DEFA4P12838 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
DEFA4P12838 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.96□□□□□ -0.49
DEFA4P12838 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
DEFA4P12838 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
DEFA4P12838 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.96□□□□□ -0.49
DEFA4P12838 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
DEFA4P12838 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.96□□□□□ -0.49
DEFA4P12838 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 CICP16-201ENST00000502609 2813 ntBASIC11.96□□□□□ -0.49
DEFA4P12838 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
DEFA4P12838 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms