Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 AL157996.1-201ENST00000624684 2299 ntBASIC14.45□□□□□ -0.1
COL6A2P12110 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.45□□□□□ -0.1
COL6A2P12110 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 MSTO2P-201ENST00000314835 1709 ntBASIC14.45□□□□□ -0.1
COL6A2P12110 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.45□□□□□ -0.1
COL6A2P12110 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 USP17L6P-201ENST00000382470 1197 ntBASIC14.45□□□□□ -0.1
COL6A2P12110 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
COL6A2P12110 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 HMGN1P19-201ENST00000436976 333 ntBASIC14.45□□□□□ -0.1
COL6A2P12110 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.45□□□□□ -0.1
COL6A2P12110 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.45□□□□□ -0.1
COL6A2P12110 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.45□□□□□ -0.1
COL6A2P12110 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.45□□□□□ -0.1
COL6A2P12110 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.45□□□□□ -0.1
COL6A2P12110 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 AC008825.2-201ENST00000603374 718 ntBASIC14.45□□□□□ -0.1
COL6A2P12110 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.45□□□□□ -0.1
COL6A2P12110 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
COL6A2P12110 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
COL6A2P12110 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
COL6A2P12110 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.45□□□□□ -0.1
COL6A2P12110 AC009093.2-202ENST00000620513 2079 ntBASIC14.45□□□□□ -0.1
COL6A2P12110 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.45□□□□□ -0.1
COL6A2P12110 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 AC111170.3-201ENST00000624282 2464 ntBASIC14.44□□□□□ -0.1
COL6A2P12110 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.44□□□□□ -0.1
COL6A2P12110 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.44□□□□□ -0.1
COL6A2P12110 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 PIN1P1-201ENST00000412108 996 ntBASIC14.44□□□□□ -0.1
COL6A2P12110 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.44□□□□□ -0.1
COL6A2P12110 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.44□□□□□ -0.1
COL6A2P12110 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.44□□□□□ -0.1
COL6A2P12110 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.44□□□□□ -0.1
COL6A2P12110 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 LINC02560-201ENST00000596379 459 ntBASIC14.44□□□□□ -0.1
COL6A2P12110 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.44□□□□□ -0.1
COL6A2P12110 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.44□□□□□ -0.1
COL6A2P12110 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.44□□□□□ -0.1
COL6A2P12110 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
COL6A2P12110 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms