Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHGAP10645 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHGAP10645 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC20.78■□□□□ 0.92
CHGAP10645 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGAP10645 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC20.78■□□□□ 0.92
CHGAP10645 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 DBET-201ENST00000630918 3363 ntBASIC20.78■□□□□ 0.92
CHGAP10645 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGAP10645 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGAP10645 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGAP10645 PYY2-201ENST00000315776 282 ntBASIC20.78■□□□□ 0.92
CHGAP10645 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC20.78■□□□□ 0.92
CHGAP10645 AC093909.3-201ENST00000504783 336 ntBASIC20.78■□□□□ 0.92
CHGAP10645 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC20.78■□□□□ 0.92
CHGAP10645 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.78■□□□□ 0.92
CHGAP10645 AC140658.4-201ENST00000561990 352 ntBASIC20.78■□□□□ 0.92
CHGAP10645 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC20.78■□□□□ 0.92
CHGAP10645 MIR4472-1-201ENST00000584349 80 ntBASIC20.78■□□□□ 0.92
CHGAP10645 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CHGAP10645 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC20.78■□□□□ 0.92
CHGAP10645 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC20.78■□□□□ 0.92
CHGAP10645 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 AL109954.1-202ENST00000564051 2148 ntBASIC20.78■□□□□ 0.92
CHGAP10645 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGAP10645 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGAP10645 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGAP10645 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.77■□□□□ 0.92
CHGAP10645 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHGAP10645 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC20.77■□□□□ 0.92
CHGAP10645 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.77■□□□□ 0.92
CHGAP10645 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.77■□□□□ 0.92
CHGAP10645 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.77■□□□□ 0.92
CHGAP10645 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.77■□□□□ 0.92
CHGAP10645 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 AC234644.1-201ENST00000406065 370 ntBASIC20.77■□□□□ 0.92
CHGAP10645 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC20.77■□□□□ 0.92
CHGAP10645 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC20.77■□□□□ 0.92
CHGAP10645 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 AC095040.1-201ENST00000513286 675 ntBASIC20.77■□□□□ 0.92
CHGAP10645 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.77■□□□□ 0.92
CHGAP10645 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 AC090386.2-201ENST00000623010 1039 ntBASIC20.77■□□□□ 0.92
CHGAP10645 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CHGAP10645 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHGAP10645 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHGAP10645 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC20.77■□□□□ 0.91
CHGAP10645 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHGAP10645 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHGAP10645 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHGAP10645 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC20.76■□□□□ 0.91
CHGAP10645 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC20.76■□□□□ 0.91
CHGAP10645 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHGAP10645 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHGAP10645 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.76■□□□□ 0.91
CHGAP10645 AREG-202ENST00000502307 956 ntTSL 5 BASIC20.76■□□□□ 0.91
CHGAP10645 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CHGAP10645 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC20.76■□□□□ 0.91
CHGAP10645 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC20.76■□□□□ 0.91
CHGAP10645 AC011247.3-201ENST00000603297 438 ntBASIC20.76■□□□□ 0.91
CHGAP10645 AC011471.3-201ENST00000623576 402 ntBASIC20.76■□□□□ 0.91
CHGAP10645 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC20.76■□□□□ 0.91
CHGAP10645 AL451007.2-201ENST00000632004 563 ntBASIC20.76■□□□□ 0.91
CHGAP10645 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CHGAP10645 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC20.76■□□□□ 0.91
CHGAP10645 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.76■□□□□ 0.91
CHGAP10645 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CHGAP10645 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.76■□□□□ 0.91
CHGAP10645 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms