Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RN7SL713P-201ENST00000582127 302 ntBASIC15.34■□□□□ 0.05
RARAP10276 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.34■□□□□ 0.05
RARAP10276 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.34■□□□□ 0.05
RARAP10276 LINC02084-201ENST00000606069 1096 ntBASIC15.34■□□□□ 0.05
RARAP10276 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.34■□□□□ 0.05
RARAP10276 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RARAP10276 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.34■□□□□ 0.05
RARAP10276 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RARAP10276 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RARAP10276 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.34■□□□□ 0.05
RARAP10276 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RARAP10276 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
RARAP10276 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RARAP10276 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RARAP10276 SBF1P1-201ENST00000444527 5631 ntBASIC15.33■□□□□ 0.05
RARAP10276 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.33■□□□□ 0.05
RARAP10276 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RARAP10276 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RARAP10276 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RARAP10276 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RARAP10276 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RARAP10276 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.33■□□□□ 0.05
RARAP10276 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 KRT43P-201ENST00000434019 910 ntBASIC15.33■□□□□ 0.04
RARAP10276 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RARAP10276 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.33■□□□□ 0.04
RARAP10276 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.33■□□□□ 0.04
RARAP10276 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.33■□□□□ 0.04
RARAP10276 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.33■□□□□ 0.04
RARAP10276 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.33■□□□□ 0.04
RARAP10276 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
RARAP10276 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.33■□□□□ 0.04
RARAP10276 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.33■□□□□ 0.04
RARAP10276 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.33■□□□□ 0.04
RARAP10276 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RARAP10276 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
RARAP10276 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RARAP10276 AC067750.1-201ENST00000608826 6545 ntBASIC15.33■□□□□ 0.04
RARAP10276 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RARAP10276 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.32■□□□□ 0.04
RARAP10276 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 MIR1202-201ENST00000408529 83 ntBASIC15.32■□□□□ 0.04
RARAP10276 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.32■□□□□ 0.04
RARAP10276 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RARAP10276 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RARAP10276 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.32■□□□□ 0.04
RARAP10276 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.32■□□□□ 0.04
RARAP10276 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RARAP10276 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.32■□□□□ 0.04
RARAP10276 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.32■□□□□ 0.04
RARAP10276 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RARAP10276 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.32■□□□□ 0.04
RARAP10276 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.32■□□□□ 0.04
RARAP10276 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms