Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
OPN1SWP03999 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
OPN1SWP03999 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
OPN1SWP03999 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 LINC02486-201ENST00000604157 3000 ntBASIC13.69□□□□□ -0.22
OPN1SWP03999 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
OPN1SWP03999 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
OPN1SWP03999 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.69□□□□□ -0.22
OPN1SWP03999 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.69□□□□□ -0.22
OPN1SWP03999 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 KHSRPP1-201ENST00000427983 1768 ntBASIC13.69□□□□□ -0.22
OPN1SWP03999 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.69□□□□□ -0.22
OPN1SWP03999 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.69□□□□□ -0.22
OPN1SWP03999 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.69□□□□□ -0.22
OPN1SWP03999 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
OPN1SWP03999 AC022137.2-201ENST00000503482 481 ntBASIC13.69□□□□□ -0.22
OPN1SWP03999 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.69□□□□□ -0.22
OPN1SWP03999 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.69□□□□□ -0.22
OPN1SWP03999 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.69□□□□□ -0.22
OPN1SWP03999 AC008494.3-201ENST00000606615 944 ntBASIC13.69□□□□□ -0.22
OPN1SWP03999 WFDC1-204ENST00000613603 549 ntBASIC13.69□□□□□ -0.22
OPN1SWP03999 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
OPN1SWP03999 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.69□□□□□ -0.22
OPN1SWP03999 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
OPN1SWP03999 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 MIR497HG-202ENST00000572453 3838 ntBASIC13.69□□□□□ -0.22
OPN1SWP03999 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
OPN1SWP03999 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 ACKR1-201ENST00000368121 1240 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 AL162726.2-201ENST00000438986 1017 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 AC245100.3-201ENST00000441281 285 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 CYMP-203ENST00000474680 1263 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 RNA5SP421-201ENST00000516864 134 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 AP001002.3-201ENST00000623482 206 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
OPN1SWP03999 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
OPN1SWP03999 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 AC009093.2-202ENST00000620513 2079 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
OPN1SWP03999 AL391825.1-201ENST00000457671 1364 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
OPN1SWP03999 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.68□□□□□ -0.22
OPN1SWP03999 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.68□□□□□ -0.22
OPN1SWP03999 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
OPN1SWP03999 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.67□□□□□ -0.22
OPN1SWP03999 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms