Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRNA1P02708 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CHRNA1P02708 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.71■□□□□ 0.11
CHRNA1P02708 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.71■□□□□ 0.11
CHRNA1P02708 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
CHRNA1P02708 AC007250.1-201ENST00000608934 338 ntBASIC15.71■□□□□ 0.11
CHRNA1P02708 AC127024.7-201ENST00000625101 200 ntBASIC15.71■□□□□ 0.11
CHRNA1P02708 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.71■□□□□ 0.11
CHRNA1P02708 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CHRNA1P02708 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 AC067931.2-201ENST00000623655 2003 ntBASIC15.71■□□□□ 0.11
CHRNA1P02708 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CHRNA1P02708 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHRNA1P02708 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CHRNA1P02708 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRNA1P02708 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.71■□□□□ 0.1
CHRNA1P02708 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRNA1P02708 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRNA1P02708 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRNA1P02708 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.71■□□□□ 0.1
CHRNA1P02708 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 AL591122.2-201ENST00000624125 1853 ntBASIC15.7■□□□□ 0.1
CHRNA1P02708 AC126177.1-201ENST00000547829 2218 ntBASIC15.7■□□□□ 0.1
CHRNA1P02708 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.7■□□□□ 0.1
CHRNA1P02708 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHRNA1P02708 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.7■□□□□ 0.1
CHRNA1P02708 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.7■□□□□ 0.1
CHRNA1P02708 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA1P02708 AC018638.5-201ENST00000450885 754 ntBASIC15.7■□□□□ 0.1
CHRNA1P02708 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRNA1P02708 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA1P02708 AC095040.1-201ENST00000513286 675 ntBASIC15.7■□□□□ 0.1
CHRNA1P02708 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA1P02708 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CHRNA1P02708 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 AL133467.4-201ENST00000602953 725 ntBASIC15.7■□□□□ 0.1
CHRNA1P02708 AP000322.3-201ENST00000608665 388 ntBASIC15.7■□□□□ 0.1
CHRNA1P02708 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CHRNA1P02708 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHRNA1P02708 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHRNA1P02708 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA1P02708 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CHRNA1P02708 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA1P02708 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA1P02708 TEKT4P2-202ENST00000559466 1312 ntBASIC15.69■□□□□ 0.1
CHRNA1P02708 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA1P02708 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 MTHFR-210ENST00000641407 2387 ntBASIC15.69■□□□□ 0.1
CHRNA1P02708 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA1P02708 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA1P02708 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA1P02708 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA1P02708 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.69■□□□□ 0.1
CHRNA1P02708 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA1P02708 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA1P02708 AC104506.1-201ENST00000609247 429 ntBASIC15.69■□□□□ 0.1
CHRNA1P02708 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA1P02708 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA1P02708 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA1P02708 CCT8L1P-201ENST00000465400 1674 ntBASIC15.69■□□□□ 0.1
CHRNA1P02708 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA1P02708 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA1P02708 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA1P02708 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms