Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.02□□□□□ -0.65
LTAP01374 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 RNU1-114P-201ENST00000365297 166 ntBASIC11.02□□□□□ -0.65
LTAP01374 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
LTAP01374 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 USP17L6P-201ENST00000382470 1197 ntBASIC11.02□□□□□ -0.65
LTAP01374 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.02□□□□□ -0.65
LTAP01374 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 EIF3FP3-201ENST00000434851 1086 ntBASIC11.02□□□□□ -0.65
LTAP01374 FDX1P1-201ENST00000449115 551 ntBASIC11.02□□□□□ -0.65
LTAP01374 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.02□□□□□ -0.65
LTAP01374 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.02□□□□□ -0.65
LTAP01374 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.02□□□□□ -0.65
LTAP01374 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.02□□□□□ -0.65
LTAP01374 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.02□□□□□ -0.65
LTAP01374 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 AC004840.1-201ENST00000636359 365 ntBASIC11.02□□□□□ -0.65
LTAP01374 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LTAP01374 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 AL022313.4-201ENST00000562756 2046 ntBASIC11.02□□□□□ -0.65
LTAP01374 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 PCDHA5-203ENST00000614258 4248 ntBASIC11.02□□□□□ -0.65
LTAP01374 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 AL590440.2-201ENST00000641973 1595 ntBASIC11.02□□□□□ -0.65
LTAP01374 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 AL118506.1-201ENST00000601296 3082 ntBASIC11.01□□□□□ -0.65
LTAP01374 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.01□□□□□ -0.65
LTAP01374 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.01□□□□□ -0.65
LTAP01374 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.01□□□□□ -0.65
LTAP01374 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 AC007431.3-201ENST00000623221 587 ntBASIC11.01□□□□□ -0.65
LTAP01374 POM121L14P-201ENST00000406100 1558 ntBASIC11.01□□□□□ -0.65
LTAP01374 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LTAP01374 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.01□□□□□ -0.65
LTAP01374 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.01□□□□□ -0.65
LTAP01374 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms