Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 AC099521.3-201ENST00000624251 2938 ntBASIC15.42■□□□□ 0.06
RTN3O95197 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN3O95197 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.42■□□□□ 0.06
RTN3O95197 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.42■□□□□ 0.06
RTN3O95197 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.42■□□□□ 0.06
RTN3O95197 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.42■□□□□ 0.06
RTN3O95197 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN3O95197 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN3O95197 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.42■□□□□ 0.06
RTN3O95197 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.42■□□□□ 0.06
RTN3O95197 SNORD3B-2-202ENST00000571722 791 ntBASIC15.42■□□□□ 0.06
RTN3O95197 AL132994.2-201ENST00000603120 687 ntBASIC15.42■□□□□ 0.06
RTN3O95197 AL645939.5-201ENST00000606834 243 ntBASIC15.42■□□□□ 0.06
RTN3O95197 AC026740.1-201ENST00000607068 791 ntBASIC15.42■□□□□ 0.06
RTN3O95197 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RTN3O95197 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
RTN3O95197 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
RTN3O95197 TUBBP5-203ENST00000508529 1334 ntBASIC15.42■□□□□ 0.06
RTN3O95197 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTN3O95197 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
RTN3O95197 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RTN3O95197 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN3O95197 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN3O95197 KRT8P28-201ENST00000433288 1390 ntBASIC15.41■□□□□ 0.06
RTN3O95197 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN3O95197 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RTN3O95197 MIR769-201ENST00000390225 118 ntBASIC15.41■□□□□ 0.06
RTN3O95197 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
RTN3O95197 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.41■□□□□ 0.06
RTN3O95197 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN3O95197 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.41■□□□□ 0.06
RTN3O95197 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 AC005077.2-201ENST00000449786 690 ntBASIC15.41■□□□□ 0.06
RTN3O95197 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.41■□□□□ 0.06
RTN3O95197 ACTG1P17-201ENST00000558391 1119 ntBASIC15.41■□□□□ 0.06
RTN3O95197 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RTN3O95197 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RTN3O95197 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 AC018529.2-202ENST00000611482 3087 ntBASIC15.41■□□□□ 0.06
RTN3O95197 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.41■□□□□ 0.06
RTN3O95197 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RTN3O95197 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.41■□□□□ 0.06
RTN3O95197 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN3O95197 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.41■□□□□ 0.06
RTN3O95197 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTN3O95197 AC126755.1-201ENST00000525846 6405 ntBASIC15.41■□□□□ 0.06
RTN3O95197 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN3O95197 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN3O95197 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RTN3O95197 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RTN3O95197 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN3O95197 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN3O95197 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RTN3O95197 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN3O95197 FAM90A7P-201ENST00000382628 1395 ntBASIC15.4■□□□□ 0.06
RTN3O95197 FAM90A23P-201ENST00000400136 1395 ntBASIC15.4■□□□□ 0.06
RTN3O95197 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RTN3O95197 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RTN3O95197 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN3O95197 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RTN3O95197 AC015688.4-201ENST00000580780 1647 ntBASIC15.4■□□□□ 0.06
RTN3O95197 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN3O95197 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RTN3O95197 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN3O95197 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RTN3O95197 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms