Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 MIR1202-201ENST00000408529 83 ntBASIC13.74□□□□□ -0.21
HCN1O60741 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 AC245100.3-201ENST00000441281 285 ntBASIC13.74□□□□□ -0.21
HCN1O60741 TPT1P11-201ENST00000458482 498 ntBASIC13.74□□□□□ -0.21
HCN1O60741 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.74□□□□□ -0.21
HCN1O60741 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.74□□□□□ -0.21
HCN1O60741 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.74□□□□□ -0.21
HCN1O60741 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.74□□□□□ -0.21
HCN1O60741 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
HCN1O60741 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.73□□□□□ -0.21
HCN1O60741 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 AC097359.2-201ENST00000604992 2389 ntBASIC13.73□□□□□ -0.21
HCN1O60741 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HCN1O60741 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HCN1O60741 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HCN1O60741 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HCN1O60741 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.73□□□□□ -0.21
HCN1O60741 AL590640.2-201ENST00000457038 527 ntBASIC13.73□□□□□ -0.21
HCN1O60741 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.73□□□□□ -0.21
HCN1O60741 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.73□□□□□ -0.21
HCN1O60741 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.73□□□□□ -0.21
HCN1O60741 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
HCN1O60741 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.73□□□□□ -0.21
HCN1O60741 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.73□□□□□ -0.21
HCN1O60741 MIR4525-201ENST00000580000 75 ntBASIC13.73□□□□□ -0.21
HCN1O60741 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.73□□□□□ -0.21
HCN1O60741 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 MIR6869-201ENST00000619434 62 ntBASIC13.73□□□□□ -0.21
HCN1O60741 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.73□□□□□ -0.21
HCN1O60741 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.73□□□□□ -0.21
HCN1O60741 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 AL354989.2-201ENST00000435838 1540 ntBASIC13.73□□□□□ -0.21
HCN1O60741 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.73□□□□□ -0.21
HCN1O60741 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HCN1O60741 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
HCN1O60741 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
HCN1O60741 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HCN1O60741 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCN1O60741 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms