Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 MIR33B-201ENST00000385104 96 ntBASIC15.2■□□□□ 0.02
SRRM3A6NNA2 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 FNTAP2-201ENST00000430308 634 ntBASIC15.2■□□□□ 0.02
SRRM3A6NNA2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AL355864.2-201ENST00000447420 863 ntBASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AL139010.1-201ENST00000454878 894 ntBASIC15.2■□□□□ 0.02
SRRM3A6NNA2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AC025048.3-201ENST00000590609 569 ntBASIC15.2■□□□□ 0.02
SRRM3A6NNA2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 PTENP1-202ENST00000532280 3996 ntBASIC15.2■□□□□ 0.02
SRRM3A6NNA2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.2■□□□□ 0.02
SRRM3A6NNA2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AC118758.2-201ENST00000614242 2813 ntBASIC15.19■□□□□ 0.02
SRRM3A6NNA2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AL355334.1-201ENST00000417713 215 ntBASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 RN7SL399P-201ENST00000471648 279 ntBASIC15.19■□□□□ 0.02
SRRM3A6NNA2 FTH1P14-201ENST00000482930 551 ntBASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AC068587.3-201ENST00000526613 355 ntBASIC15.19■□□□□ 0.02
SRRM3A6NNA2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 Z82170.1-201ENST00000625081 3192 ntBASIC15.19■□□□□ 0.02
SRRM3A6NNA2 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.19■□□□□ 0.02
SRRM3A6NNA2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRRM3A6NNA2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms