Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AL603764.1-201ENST00000636452 321 ntBASIC12.73□□□□□ -0.37
SHISA3A0PJX4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AC115284.2-201ENST00000624646 2054 ntBASIC12.73□□□□□ -0.37
SHISA3A0PJX4 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 AC004967.1-201ENST00000453589 447 ntBASIC12.72□□□□□ -0.37
SHISA3A0PJX4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 FO681548.1-201ENST00000455617 1132 ntBASIC12.72□□□□□ -0.37
SHISA3A0PJX4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 AC109322.1-201ENST00000524499 1264 ntBASIC12.72□□□□□ -0.37
SHISA3A0PJX4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 AC036164.1-201ENST00000570544 333 ntBASIC12.72□□□□□ -0.37
SHISA3A0PJX4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 SRD5A3P1-201ENST00000603021 949 ntBASIC12.72□□□□□ -0.37
SHISA3A0PJX4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHISA3A0PJX4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC102953.2-201ENST00000609755 3026 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC211486.1-202ENST00000416371 468 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AL161932.2-201ENST00000435436 679 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.71□□□□□ -0.37
SHISA3A0PJX4 RN7SL399P-201ENST00000471648 279 ntBASIC12.71□□□□□ -0.37
SHISA3A0PJX4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms