Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC117489.1-201ENST00000625169 3217 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 MIR1909-201ENST00000411312 80 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 BCAS2P3-201ENST00000416374 767 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 TRIM60P13-201ENST00000432350 1283 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 RNU6-415P-201ENST00000516252 97 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 AC013731.1-201ENST00000604340 883 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 FO681491.1-202ENST00000623392 737 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 AC008687.7-202ENST00000637404 953 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 AGGF1P1-201ENST00000509500 2073 ntBASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB13Q9Y5F0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 AC009093.2-202ENST00000620513 2079 ntBASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 AL445669.2-201ENST00000454425 421 ntBASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 C2orf69P2-201ENST00000562032 1123 ntBASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 AC073413.1-201ENST00000603927 732 ntBASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 ZACNP1-201ENST00000612259 710 ntBASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 AC002472.3-201ENST00000640124 621 ntBASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB13Q9Y5F0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB13Q9Y5F0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms