Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC007274.2-201ENST00000421675 662 ntBASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC073150.1-201ENST00000450406 1084 ntBASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 PFN2-206ENST00000461930 606 ntTSL 4 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 PGAM1P5-201ENST00000548011 764 ntBASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC003686.1-201ENST00000550956 1034 ntBASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC020922.3-201ENST00000595064 547 ntBASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 INTS4P1-203ENST00000641008 3683 ntBASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00588Q9Y4M8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms