Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 IGHEP2-201ENST00000519308 1256 ntBASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 TYMSP2-201ENST00000589501 424 ntBASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 FKBP4P8-201ENST00000610931 1369 ntBASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ZC3H4Q9UPT8 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AC013726.1-201ENST00000563747 2285 ntBASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 KRT8P30-201ENST00000432100 650 ntBASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AC005777.1-201ENST00000588332 187 ntBASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AP005264.5-201ENST00000590066 467 ntBASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AL359091.4-201ENST00000610052 409 ntBASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZC3H4Q9UPT8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 AGGF1P1-201ENST00000509500 2073 ntBASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 EEF1DP5-201ENST00000431410 772 ntBASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 RN7SL846P-201ENST00000467429 292 ntBASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 RPS18P9-201ENST00000482817 460 ntBASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 KRT18P37-201ENST00000520711 1282 ntBASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 CTBP2P6-201ENST00000526402 1229 ntBASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.41■□□□□ 0.38
ZC3H4Q9UPT8 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms