Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBQLN2Q9UHD9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
UBQLN2Q9UHD9 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
UBQLN2Q9UHD9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBQLN2Q9UHD9 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AL671277.1-201ENST00000429656 993 ntBASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AC004967.1-201ENST00000453589 447 ntBASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 SNHG9-202ENST00000564014 471 ntBASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AC006538.3-201ENST00000612495 578 ntBASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AL161645.1-201ENST00000622716 1255 ntBASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 AGAP10P-201ENST00000454844 2418 ntBASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBQLN2Q9UHD9 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 AC027369.3-201ENST00000530465 3707 ntBASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 AC125807.2-201ENST00000513358 3514 ntBASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 PMS2P4-201ENST00000412466 1052 ntBASIC12.41□□□□□ -0.42
UBQLN2Q9UHD9 AL355306.1-201ENST00000415580 579 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms