Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 ST13P19-201ENST00000442505 1124 ntBASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 PGAM1P5-201ENST00000548011 764 ntBASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AC020922.3-201ENST00000595064 547 ntBASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CLCF1Q9UBD9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 ST20-AS1-201ENST00000560255 4223 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC073150.1-201ENST00000450406 1084 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC116345.2-201ENST00000512837 523 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 POU5F1P2-201ENST00000521750 823 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 MIR4754-201ENST00000582477 89 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 MIR3188-201ENST00000583494 85 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC079336.7-201ENST00000623428 1078 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC015967.2-201ENST00000624092 234 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AC006435.4-201ENST00000625037 234 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 AL356737.1-201ENST00000634391 234 ntBASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLCF1Q9UBD9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLCF1Q9UBD9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CLCF1Q9UBD9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.96□□□□□ -0.34
CLCF1Q9UBD9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLCF1Q9UBD9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms