Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AL136172.1-201ENST00000598590 1394 ntBASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 COX5BP8-201ENST00000416911 349 ntBASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 KRT17P7-201ENST00000451704 1104 ntBASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 DUX4L47-201ENST00000566374 394 ntBASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AP001063.1-201ENST00000568332 529 ntBASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIN7CQ9NUP9 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 ACKR1-201ENST00000368121 1240 ntBASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 AL512384.1-201ENST00000406683 331 ntBASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms