Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 LINC00982-205ENST00000420957 435 ntBASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 MIR4492-201ENST00000581627 80 ntBASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 AL354811.1-201ENST00000610286 706 ntBASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 MORC2-201ENST00000215862 4469 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 LINC00563-201ENST00000566370 1400 ntBASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 SLC7A7-202ENST00000397528 2098 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 SLC7A7-203ENST00000397529 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 AC006372.3-201ENST00000444158 4049 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 Z95114.4-201ENST00000623420 3578 ntBASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC7.24□□□□□ -1.25
CDC42SE1Q9NRR8 TBX19-201ENST00000367821 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 ZNF619-204ENST00000447116 4153 ntAPPRIS P4 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 KLC2-202ENST00000394065 3755 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AL157832.2-205ENST00000597245 1649 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 LRAT-201ENST00000336356 4928 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 LINC00538-201ENST00000626109 1906 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AL592287.1-201ENST00000637598 2074 ntTSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 SIGLEC10-206ENST00000441969 2768 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 SEMA4A-202ENST00000368282 3249 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 EIF4BP7-201ENST00000432307 1813 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 MARCH6-208ENST00000510792 1963 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 UBE2SP1-201ENST00000450587 669 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AC007322.4-201ENST00000509611 723 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms