Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.85□□□□□ -0.35
CDH20Q9HBT6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.85□□□□□ -0.35
CDH20Q9HBT6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 AC022447.6-201ENST00000515522 438 ntBASIC12.84□□□□□ -0.35
CDH20Q9HBT6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 BX088702.1-201ENST00000610784 235 ntBASIC12.84□□□□□ -0.35
CDH20Q9HBT6 AC244157.2-201ENST00000616239 1006 ntBASIC12.84□□□□□ -0.35
CDH20Q9HBT6 AC009542.2-202ENST00000619004 1067 ntBASIC12.84□□□□□ -0.35
CDH20Q9HBT6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 AL390755.1-201ENST00000623716 2027 ntBASIC12.84□□□□□ -0.35
CDH20Q9HBT6 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDH20Q9HBT6 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.83□□□□□ -0.35
CDH20Q9HBT6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 CHMP1AP1-201ENST00000445563 662 ntBASIC12.83□□□□□ -0.36
CDH20Q9HBT6 Z93015.1-201ENST00000451718 390 ntBASIC12.83□□□□□ -0.36
CDH20Q9HBT6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 RN7SL560P-201ENST00000577943 264 ntBASIC12.83□□□□□ -0.36
CDH20Q9HBT6 AL358472.3-201ENST00000608147 415 ntBASIC12.83□□□□□ -0.36
CDH20Q9HBT6 MIR6752-201ENST00000618442 71 ntBASIC12.83□□□□□ -0.36
CDH20Q9HBT6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms