Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 AC007431.3-201ENST00000623221 587 ntBASIC18.01■□□□□ 0.47
UPF2Q9HAU5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18■□□□□ 0.47
UPF2Q9HAU5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UPF2Q9HAU5 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 TP73-201ENST00000346387 4854 ntTSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18■□□□□ 0.47
UPF2Q9HAU5 BX842568.4-201ENST00000421222 227 ntBASIC18■□□□□ 0.47
UPF2Q9HAU5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18■□□□□ 0.47
UPF2Q9HAU5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 AC114812.1-204ENST00000449669 728 ntBASIC18■□□□□ 0.47
UPF2Q9HAU5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 AC109322.1-201ENST00000524499 1264 ntBASIC18■□□□□ 0.47
UPF2Q9HAU5 AC131206.1-201ENST00000538078 1211 ntBASIC18■□□□□ 0.47
UPF2Q9HAU5 AC025678.2-201ENST00000562061 970 ntBASIC18■□□□□ 0.47
UPF2Q9HAU5 AC027612.4-201ENST00000605371 583 ntBASIC18■□□□□ 0.47
UPF2Q9HAU5 AL158211.3-201ENST00000607385 239 ntBASIC18■□□□□ 0.47
UPF2Q9HAU5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
UPF2Q9HAU5 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UPF2Q9HAU5 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UPF2Q9HAU5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 AL157996.1-201ENST00000624684 2299 ntBASIC18■□□□□ 0.47
UPF2Q9HAU5 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UPF2Q9HAU5 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.99■□□□□ 0.47
UPF2Q9HAU5 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 GIMAP3P-201ENST00000495150 836 ntBASIC17.99■□□□□ 0.47
UPF2Q9HAU5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.99■□□□□ 0.47
UPF2Q9HAU5 SRD5A3P1-201ENST00000603021 949 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms