Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 AC016700.1-201ENST00000429424 312 ntBASIC16.12■□□□□ 0.17
TRIM6Q9C030 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 IGHJ2P-201ENST00000454480 60 ntBASIC16.12■□□□□ 0.17
TRIM6Q9C030 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 MIR4783-201ENST00000580343 82 ntBASIC16.12■□□□□ 0.17
TRIM6Q9C030 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 AL008718.2-201ENST00000609206 1313 ntBASIC16.12■□□□□ 0.17
TRIM6Q9C030 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM6Q9C030 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM6Q9C030 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 AL008707.1-201ENST00000422498 534 ntBASIC16.11■□□□□ 0.17
TRIM6Q9C030 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 AC104073.2-201ENST00000453737 312 ntBASIC16.11■□□□□ 0.17
TRIM6Q9C030 CICP12-201ENST00000455801 843 ntBASIC16.11■□□□□ 0.17
TRIM6Q9C030 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 AC008805.1-201ENST00000590892 364 ntBASIC16.11■□□□□ 0.17
TRIM6Q9C030 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 MIR6720-201ENST00000611664 98 ntBASIC16.11■□□□□ 0.17
TRIM6Q9C030 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 AC067750.1-201ENST00000608826 6545 ntBASIC16.11■□□□□ 0.17
TRIM6Q9C030 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM6Q9C030 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM6Q9C030 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM6Q9C030 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.1■□□□□ 0.17
TRIM6Q9C030 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM6Q9C030 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRIM6Q9C030 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM6Q9C030 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM6Q9C030 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRIM6Q9C030 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRIM6Q9C030 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM6Q9C030 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM6Q9C030 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms