Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AC012441.2-201ENST00000444843 739 ntBASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 EIF4HP1-201ENST00000453115 687 ntBASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 ZNF767P-206ENST00000513792 565 ntBASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 RN7SL163P-201ENST00000583100 276 ntBASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AC009884.2-201ENST00000603110 324 ntBASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AL451050.2-201ENST00000606967 682 ntBASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 GRK6P1-201ENST00000400595 1711 ntBASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 CICP12-201ENST00000455801 843 ntBASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AKR7A2P1-201ENST00000460134 915 ntBASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AC044849.1-201ENST00000519737 1188 ntBASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms