Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 PIN1P1-201ENST00000412108 996 ntBASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AC190387.1-201ENST00000551683 408 ntBASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 WASH4P-201ENST00000564273 1246 ntBASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AC005252.2-201ENST00000624630 1141 ntBASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AC005562.1-201ENST00000583030 3219 ntBASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 AL023775.1-201ENST00000454907 1746 ntBASIC11.72□□□□□ -0.53
CHRDL1Q9BU40 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 CICP17-201ENST00000418553 2377 ntBASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 AC018665.1-201ENST00000622927 1362 ntBASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 KLF2P2-201ENST00000416807 1039 ntBASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 TERF1P3-201ENST00000505638 1227 ntBASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 AC140912.1-201ENST00000577171 1054 ntBASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 WFDC1-204ENST00000613603 549 ntBASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CHRDL1Q9BU40 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CHRDL1Q9BU40 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms