Protein–RNA interactions for Protein: Q9BTV4

TMEM43, Transmembrane protein 43, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43Q9BTV4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM43Q9BTV4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM43Q9BTV4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TMEM43Q9BTV4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.27
TMEM43Q9BTV4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 CR383656.2-201ENST00000548656 2254 ntBASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 AC233724.13-201ENST00000598383 410 ntBASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 AL022328.1-201ENST00000610050 478 ntBASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 AC020910.6-201ENST00000623084 1459 ntBASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM43Q9BTV4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 AL591122.2-201ENST00000624125 1853 ntBASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 RN7SL692P-201ENST00000464677 288 ntBASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 ECM1P1-201ENST00000604092 1279 ntBASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 TCAM1P-207ENST00000485295 1537 ntBASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 AC015818.8-201ENST00000587907 1519 ntBASIC13.38□□□□□ -0.27
TMEM43Q9BTV4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms