Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 KHSRPP1-201ENST00000427983 1768 ntBASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 MYCLP2-201ENST00000449268 967 ntBASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 AC139530.3-201ENST00000620344 690 ntBASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 AP001002.3-201ENST00000623482 206 ntBASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 TCAF1P1-201ENST00000414990 2232 ntBASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HDHD3Q9BSH5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 CLUHP2-201ENST00000426660 1303 ntBASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 AL031595.1-201ENST00000623969 4709 ntBASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms