Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 AC097359.2-201ENST00000604992 2389 ntBASIC13.03□□□□□ -0.32
VRK1Q99986 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 AC099521.3-201ENST00000624251 2938 ntBASIC13.03□□□□□ -0.32
VRK1Q99986 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.03□□□□□ -0.32
VRK1Q99986 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 AC089987.1-201ENST00000551654 2209 ntBASIC13.03□□□□□ -0.32
VRK1Q99986 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 TPM3P8-201ENST00000330554 643 ntBASIC13.03□□□□□ -0.32
VRK1Q99986 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 FAM197Y7-201ENST00000432892 766 ntBASIC13.03□□□□□ -0.32
VRK1Q99986 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 AL355994.2-201ENST00000447882 704 ntBASIC13.03□□□□□ -0.32
VRK1Q99986 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.03□□□□□ -0.32
VRK1Q99986 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.03□□□□□ -0.32
VRK1Q99986 GNRHR2-203ENST00000581100 1187 ntBASIC13.03□□□□□ -0.32
VRK1Q99986 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.03□□□□□ -0.32
VRK1Q99986 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VRK1Q99986 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VRK1Q99986 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VRK1Q99986 AC007787.1-201ENST00000588095 1583 ntBASIC13.03□□□□□ -0.32
VRK1Q99986 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 AL158070.2-201ENST00000623713 1621 ntBASIC13.02□□□□□ -0.32
VRK1Q99986 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.02□□□□□ -0.32
VRK1Q99986 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 AL356585.2-201ENST00000625078 2396 ntBASIC13.02□□□□□ -0.32
VRK1Q99986 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.02□□□□□ -0.32
VRK1Q99986 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.02□□□□□ -0.32
VRK1Q99986 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
VRK1Q99986 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.02□□□□□ -0.32
VRK1Q99986 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
VRK1Q99986 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms