Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 MIR661-201ENST00000384842 89 ntBASIC16.81■□□□□ 0.28
ARID3AQ99856 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.81■□□□□ 0.28
ARID3AQ99856 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.81■□□□□ 0.28
ARID3AQ99856 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.81■□□□□ 0.28
ARID3AQ99856 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.81■□□□□ 0.28
ARID3AQ99856 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 AC092337.1-201ENST00000568699 1129 ntBASIC16.81■□□□□ 0.28
ARID3AQ99856 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.81■□□□□ 0.28
ARID3AQ99856 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.81■□□□□ 0.28
ARID3AQ99856 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.81■□□□□ 0.28
ARID3AQ99856 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.81■□□□□ 0.28
ARID3AQ99856 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ARID3AQ99856 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC16.81■□□□□ 0.28
ARID3AQ99856 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ARID3AQ99856 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
ARID3AQ99856 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.81■□□□□ 0.28
ARID3AQ99856 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARID3AQ99856 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.8■□□□□ 0.28
ARID3AQ99856 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 AL645937.6-201ENST00000641122 3727 ntBASIC16.8■□□□□ 0.28
ARID3AQ99856 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC16.8■□□□□ 0.28
ARID3AQ99856 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARID3AQ99856 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
ARID3AQ99856 SERPINA7P1-201ENST00000443077 631 ntBASIC16.8■□□□□ 0.28
ARID3AQ99856 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
ARID3AQ99856 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ARID3AQ99856 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.8■□□□□ 0.28
ARID3AQ99856 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.8■□□□□ 0.28
ARID3AQ99856 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.8■□□□□ 0.28
ARID3AQ99856 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.8■□□□□ 0.28
ARID3AQ99856 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.8■□□□□ 0.28
ARID3AQ99856 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.8■□□□□ 0.28
ARID3AQ99856 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.8■□□□□ 0.28
ARID3AQ99856 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.8■□□□□ 0.28
ARID3AQ99856 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 AC022400.8-201ENST00000623453 3599 ntBASIC16.8■□□□□ 0.28
ARID3AQ99856 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARID3AQ99856 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ARID3AQ99856 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
ARID3AQ99856 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARID3AQ99856 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.79■□□□□ 0.28
ARID3AQ99856 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 AC152010.1-201ENST00000415779 2006 ntBASIC16.79■□□□□ 0.28
ARID3AQ99856 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 AL356488.3-201ENST00000608574 2888 ntBASIC16.79■□□□□ 0.28
ARID3AQ99856 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms