Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCL19Q99731 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCL19Q99731 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL19Q99731 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL19Q99731 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL19Q99731 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 MIR645-201ENST00000385283 94 ntBASIC12.23□□□□□ -0.45
CCL19Q99731 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL19Q99731 BCAS2P2-201ENST00000425064 674 ntBASIC12.23□□□□□ -0.45
CCL19Q99731 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL19Q99731 AC098934.1-203ENST00000442868 1262 ntBASIC12.23□□□□□ -0.45
CCL19Q99731 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL19Q99731 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL19Q99731 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 C2orf69P1-201ENST00000563532 1093 ntBASIC12.23□□□□□ -0.45
CCL19Q99731 AC141586.1-203ENST00000567242 366 ntBASIC12.23□□□□□ -0.45
CCL19Q99731 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL19Q99731 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL19Q99731 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCL19Q99731 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.23□□□□□ -0.45
CCL19Q99731 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL19Q99731 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 KHSRPP1-201ENST00000427983 1768 ntBASIC12.23□□□□□ -0.45
CCL19Q99731 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL19Q99731 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 AC006372.4-201ENST00000624122 1543 ntBASIC12.22□□□□□ -0.45
CCL19Q99731 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CCL19Q99731 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL19Q99731 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CCL19Q99731 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC12.22□□□□□ -0.45
CCL19Q99731 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.22□□□□□ -0.45
CCL19Q99731 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.22□□□□□ -0.45
CCL19Q99731 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.22□□□□□ -0.45
CCL19Q99731 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 MIR2392-201ENST00000584881 84 ntBASIC12.22□□□□□ -0.45
CCL19Q99731 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL19Q99731 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 AC140113.1-201ENST00000603467 169 ntBASIC12.22□□□□□ -0.45
CCL19Q99731 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CCL19Q99731 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCL19Q99731 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL19Q99731 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL19Q99731 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCL19Q99731 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CCL19Q99731 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL19Q99731 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL19Q99731 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CCL19Q99731 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL19Q99731 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL19Q99731 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL19Q99731 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms