Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.7□□□□□ -0.22
NUP43Q8NFH3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 BOLA2P3-201ENST00000404566 256 ntBASIC13.7□□□□□ -0.22
NUP43Q8NFH3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 CNN2P10-201ENST00000443067 918 ntBASIC13.7□□□□□ -0.22
NUP43Q8NFH3 CHMP1AP1-201ENST00000445563 662 ntBASIC13.7□□□□□ -0.22
NUP43Q8NFH3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 HOMER2P2-201ENST00000451621 847 ntBASIC13.7□□□□□ -0.22
NUP43Q8NFH3 KLF2P4-201ENST00000451959 1225 ntBASIC13.7□□□□□ -0.22
NUP43Q8NFH3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 KRT17P8-201ENST00000540749 863 ntBASIC13.7□□□□□ -0.22
NUP43Q8NFH3 AC106886.1-201ENST00000568660 600 ntBASIC13.7□□□□□ -0.22
NUP43Q8NFH3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 TCAM1P-207ENST00000485295 1537 ntBASIC13.69□□□□□ -0.22
NUP43Q8NFH3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 CICP16-201ENST00000502609 2813 ntBASIC13.69□□□□□ -0.22
NUP43Q8NFH3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 GAPDHP21-201ENST00000450301 1010 ntBASIC13.69□□□□□ -0.22
NUP43Q8NFH3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 AC079316.1-201ENST00000548397 411 ntBASIC13.69□□□□□ -0.22
NUP43Q8NFH3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NUP43Q8NFH3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms