Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 INE2-201ENST00000630399 1874 ntBASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AC092933.1-201ENST00000393644 945 ntBASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 INE1-201ENST00000456273 945 ntBASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AL391280.1-201ENST00000506969 1062 ntBASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AL596325.1-201ENST00000563991 1082 ntBASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AP001002.3-201ENST00000623482 206 ntBASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AP000593.2-201ENST00000542775 1433 ntBASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF439Q8NDP4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 FKBP4P6-201ENST00000457486 1332 ntBASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 MYADML-201ENST00000474610 2147 ntBASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 AL359183.1-201ENST00000623796 2132 ntBASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 RN7SKP175-201ENST00000408472 289 ntBASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 AP005018.1-201ENST00000525475 301 ntBASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ZNF439Q8NDP4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms