Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C11orf88Q6PI97 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 CYP4F24P-201ENST00000586049 1580 ntBASIC12.87□□□□□ -0.35
C11orf88Q6PI97 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.87□□□□□ -0.35
C11orf88Q6PI97 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 TSSK5P-201ENST00000423978 907 ntBASIC12.87□□□□□ -0.35
C11orf88Q6PI97 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 RN7SL828P-201ENST00000607615 303 ntBASIC12.87□□□□□ -0.35
C11orf88Q6PI97 AL035252.4-201ENST00000624174 288 ntBASIC12.87□□□□□ -0.35
C11orf88Q6PI97 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 AC011481.3-201ENST00000623895 5594 ntBASIC12.87□□□□□ -0.35
C11orf88Q6PI97 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
C11orf88Q6PI97 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms