Protein–RNA interactions for Protein: Q08E93

FAM27E3, Protein FAM27E3, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E3Q08E93 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27E3Q08E93 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 AP000356.3-201ENST00000382243 753 ntBASIC12.67□□□□□ -0.38
FAM27E3Q08E93 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 SIGLEC18P-201ENST00000602271 909 ntBASIC12.67□□□□□ -0.38
FAM27E3Q08E93 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM27E3Q08E93 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 MTHFR-210ENST00000641407 2387 ntBASIC12.66□□□□□ -0.38
FAM27E3Q08E93 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 AP002353.1-201ENST00000528257 1599 ntBASIC12.66□□□□□ -0.38
FAM27E3Q08E93 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 AC008267.1-201ENST00000474858 1069 ntBASIC12.66□□□□□ -0.38
FAM27E3Q08E93 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 IQSEC3P1-201ENST00000538799 536 ntBASIC12.66□□□□□ -0.38
FAM27E3Q08E93 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.66□□□□□ -0.38
FAM27E3Q08E93 AC007326.1-201ENST00000604539 458 ntBASIC12.66□□□□□ -0.38
FAM27E3Q08E93 AC018635.2-201ENST00000608625 364 ntBASIC12.66□□□□□ -0.38
FAM27E3Q08E93 AL022334.2-201ENST00000610000 484 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms