Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLTCQ00610 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.41■□□□□ 0.86
CLTCQ00610 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC20.41■□□□□ 0.86
CLTCQ00610 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CLTCQ00610 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.41■□□□□ 0.86
CLTCQ00610 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC20.41■□□□□ 0.86
CLTCQ00610 AL356000.1-201ENST00000441073 1238 ntBASIC20.41■□□□□ 0.86
CLTCQ00610 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 AC079250.1-201ENST00000456046 531 ntBASIC20.41■□□□□ 0.86
CLTCQ00610 AC007679.1-201ENST00000458609 502 ntBASIC20.41■□□□□ 0.86
CLTCQ00610 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC20.41■□□□□ 0.86
CLTCQ00610 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLTCQ00610 AC103702.1-201ENST00000548801 2630 ntBASIC20.41■□□□□ 0.86
CLTCQ00610 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTCQ00610 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLTCQ00610 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLTCQ00610 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.4■□□□□ 0.86
CLTCQ00610 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CLTCQ00610 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CLTCQ00610 HDGF-202ENST00000368206 960 ntTSL 5 BASIC20.4■□□□□ 0.86
CLTCQ00610 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC20.4■□□□□ 0.86
CLTCQ00610 SNRPCP15-201ENST00000424055 192 ntBASIC20.4■□□□□ 0.86
CLTCQ00610 RN7SL173P-201ENST00000461853 292 ntBASIC20.4■□□□□ 0.86
CLTCQ00610 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC20.4■□□□□ 0.86
CLTCQ00610 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC20.4■□□□□ 0.86
CLTCQ00610 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC20.4■□□□□ 0.86
CLTCQ00610 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC20.4■□□□□ 0.86
CLTCQ00610 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CLTCQ00610 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC20.4■□□□□ 0.86
CLTCQ00610 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTCQ00610 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CLTCQ00610 AC011498.7-201ENST00000624986 2027 ntBASIC20.39■□□□□ 0.86
CLTCQ00610 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLTCQ00610 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLTCQ00610 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLTCQ00610 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLTCQ00610 KRT19P4-201ENST00000443208 943 ntBASIC20.39■□□□□ 0.86
CLTCQ00610 AC026412.1-206ENST00000502273 206 ntBASIC20.39■□□□□ 0.86
CLTCQ00610 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC20.39■□□□□ 0.86
CLTCQ00610 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC20.39■□□□□ 0.86
CLTCQ00610 INO80E-209ENST00000567254 625 ntTSL 2 BASIC20.39■□□□□ 0.86
CLTCQ00610 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC20.39■□□□□ 0.86
CLTCQ00610 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC20.39■□□□□ 0.86
CLTCQ00610 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CLTCQ00610 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC20.39■□□□□ 0.86
CLTCQ00610 AC005865.2-202ENST00000635814 725 ntBASIC20.39■□□□□ 0.86
CLTCQ00610 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLTCQ00610 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 MARS-233ENST00000628866 2583 ntTSL 5 BASIC20.39■□□□□ 0.85
CLTCQ00610 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLTCQ00610 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CLTCQ00610 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.39■□□□□ 0.85
CLTCQ00610 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20.39■□□□□ 0.85
CLTCQ00610 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CLTCQ00610 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC20.39■□□□□ 0.85
CLTCQ00610 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTCQ00610 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC20.38■□□□□ 0.85
CLTCQ00610 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLTCQ00610 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLTCQ00610 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLTCQ00610 AC005722.1-201ENST00000431878 964 ntBASIC20.38■□□□□ 0.85
CLTCQ00610 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC20.38■□□□□ 0.85
CLTCQ00610 AC008494.1-201ENST00000497612 796 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms