Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SRPXP78539 AL391647.1-201ENST00000395664 511 ntBASIC12.09□□□□□ -0.47
SRPXP78539 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.09□□□□□ -0.47
SRPXP78539 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.09□□□□□ -0.47
SRPXP78539 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.09□□□□□ -0.47
SRPXP78539 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.09□□□□□ -0.47
SRPXP78539 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 AC026434.2-201ENST00000506094 1078 ntBASIC12.09□□□□□ -0.47
SRPXP78539 YBX1P5-201ENST00000509441 847 ntBASIC12.09□□□□□ -0.47
SRPXP78539 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.09□□□□□ -0.47
SRPXP78539 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 KRT18P58-201ENST00000527480 1120 ntBASIC12.09□□□□□ -0.47
SRPXP78539 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.09□□□□□ -0.47
SRPXP78539 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 AL049840.4-201ENST00000602422 811 ntBASIC12.09□□□□□ -0.47
SRPXP78539 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.09□□□□□ -0.47
SRPXP78539 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.09□□□□□ -0.47
SRPXP78539 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.09□□□□□ -0.47
SRPXP78539 AC073592.8-201ENST00000624126 511 ntBASIC12.09□□□□□ -0.47
SRPXP78539 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SRPXP78539 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.09□□□□□ -0.47
SRPXP78539 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SRPXP78539 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.09□□□□□ -0.47
SRPXP78539 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 AC087499.5-201ENST00000452760 1342 ntBASIC12.09□□□□□ -0.47
SRPXP78539 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 NCLP1-201ENST00000445357 1963 ntBASIC12.09□□□□□ -0.47
SRPXP78539 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.09□□□□□ -0.47
SRPXP78539 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRPXP78539 REXO1L1P-201ENST00000379010 6598 ntBASIC12.08□□□□□ -0.47
SRPXP78539 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.08□□□□□ -0.47
SRPXP78539 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
SRPXP78539 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
SRPXP78539 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 AL157996.1-201ENST00000624684 2299 ntBASIC12.08□□□□□ -0.48
SRPXP78539 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.08□□□□□ -0.48
SRPXP78539 AGAP10P-201ENST00000454844 2418 ntBASIC12.08□□□□□ -0.48
SRPXP78539 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SRPXP78539 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
SRPXP78539 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 MIR940-201ENST00000401276 94 ntBASIC12.08□□□□□ -0.48
SRPXP78539 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.08□□□□□ -0.48
SRPXP78539 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.08□□□□□ -0.48
SRPXP78539 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.08□□□□□ -0.48
SRPXP78539 AC114812.1-204ENST00000449669 728 ntBASIC12.08□□□□□ -0.48
SRPXP78539 FAM86LP-201ENST00000478302 853 ntBASIC12.08□□□□□ -0.48
SRPXP78539 GIMAP3P-201ENST00000495150 836 ntBASIC12.08□□□□□ -0.48
SRPXP78539 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.08□□□□□ -0.48
SRPXP78539 AC069262.1-201ENST00000539058 672 ntBASIC12.08□□□□□ -0.48
SRPXP78539 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 AC092865.5-201ENST00000545435 363 ntBASIC12.08□□□□□ -0.48
SRPXP78539 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SRPXP78539 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.08□□□□□ -0.48
SRPXP78539 AC044860.1-202ENST00000559481 777 ntBASIC12.08□□□□□ -0.48
SRPXP78539 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.08□□□□□ -0.48
SRPXP78539 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.08□□□□□ -0.48
SRPXP78539 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.08□□□□□ -0.48
SRPXP78539 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.08□□□□□ -0.48
SRPXP78539 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
SRPXP78539 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms