Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 FAU-201ENST00000279259 461 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 AL161932.2-201ENST00000435436 679 ntBASIC17.03■□□□□ 0.32
CNTNAP1P78357 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 RPS18P9-201ENST00000482817 460 ntBASIC17.03■□□□□ 0.32
CNTNAP1P78357 AC140658.4-201ENST00000561990 352 ntBASIC17.03■□□□□ 0.32
CNTNAP1P78357 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 RN7SL602P-201ENST00000578326 324 ntBASIC17.03■□□□□ 0.32
CNTNAP1P78357 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 RN7SL718P-201ENST00000581254 303 ntBASIC17.03■□□□□ 0.32
CNTNAP1P78357 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 AC018529.2-202ENST00000611482 3087 ntBASIC17.03■□□□□ 0.32
CNTNAP1P78357 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP1P78357 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP1P78357 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 SNORA57-201ENST00000383870 149 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC098657.1-201ENST00000416270 1135 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 AHCYP3-201ENST00000420053 1279 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 SCARNA12-201ENST00000459155 270 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC108724.1-201ENST00000481669 352 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC105917.1-201ENST00000506637 2539 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC113347.2-201ENST00000512350 279 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC008741.2-201ENST00000612792 3115 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC020922.4-201ENST00000621389 339 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC022532.1-201ENST00000624563 1728 ntBASIC17.02■□□□□ 0.32
CNTNAP1P78357 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP1P78357 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CNTNAP1P78357 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms