Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ASIC1P78348 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.34■□□□□ 0.21
ASIC1P78348 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.34■□□□□ 0.21
ASIC1P78348 AC005840.4-201ENST00000541242 2494 ntBASIC16.34■□□□□ 0.21
ASIC1P78348 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ASIC1P78348 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.33■□□□□ 0.21
ASIC1P78348 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ASIC1P78348 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ASIC1P78348 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ASIC1P78348 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.33■□□□□ 0.21
ASIC1P78348 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
ASIC1P78348 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.33■□□□□ 0.2
ASIC1P78348 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
ASIC1P78348 BOLA2P3-201ENST00000404566 256 ntBASIC16.33■□□□□ 0.2
ASIC1P78348 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.33■□□□□ 0.2
ASIC1P78348 CNN2P10-201ENST00000443067 918 ntBASIC16.33■□□□□ 0.2
ASIC1P78348 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 AC027237.1-201ENST00000560942 655 ntBASIC16.33■□□□□ 0.2
ASIC1P78348 AP006547.1-201ENST00000563435 692 ntBASIC16.33■□□□□ 0.2
ASIC1P78348 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.33■□□□□ 0.2
ASIC1P78348 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.33■□□□□ 0.2
ASIC1P78348 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 AC009093.10-201ENST00000641956 1442 ntBASIC16.33■□□□□ 0.2
ASIC1P78348 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ASIC1P78348 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.33■□□□□ 0.2
ASIC1P78348 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ASIC1P78348 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ASIC1P78348 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ASIC1P78348 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ASIC1P78348 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.33■□□□□ 0.2
ASIC1P78348 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.33■□□□□ 0.2
ASIC1P78348 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.33■□□□□ 0.2
ASIC1P78348 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ASIC1P78348 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.33■□□□□ 0.2
ASIC1P78348 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
ASIC1P78348 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.32■□□□□ 0.2
ASIC1P78348 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 AC026954.1-201ENST00000429771 1293 ntBASIC16.32■□□□□ 0.2
ASIC1P78348 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.32■□□□□ 0.2
ASIC1P78348 CHMP1AP1-201ENST00000445563 662 ntBASIC16.32■□□□□ 0.2
ASIC1P78348 HIST2H2BB-201ENST00000449108 381 ntBASIC16.32■□□□□ 0.2
ASIC1P78348 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ASIC1P78348 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.32■□□□□ 0.2
ASIC1P78348 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.32■□□□□ 0.2
ASIC1P78348 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.32■□□□□ 0.2
ASIC1P78348 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 AC106886.1-201ENST00000568660 600 ntBASIC16.32■□□□□ 0.2
ASIC1P78348 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.32■□□□□ 0.2
ASIC1P78348 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.32■□□□□ 0.2
ASIC1P78348 AL512343.1-201ENST00000605837 169 ntBASIC16.32■□□□□ 0.2
ASIC1P78348 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ASIC1P78348 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.32■□□□□ 0.2
ASIC1P78348 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ASIC1P78348 AC027601.3-201ENST00000622907 509 ntBASIC16.32■□□□□ 0.2
ASIC1P78348 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ASIC1P78348 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ASIC1P78348 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ASIC1P78348 MST1P2-201ENST00000457982 2291 ntBASIC16.31■□□□□ 0.2
ASIC1P78348 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ASIC1P78348 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.31■□□□□ 0.2
ASIC1P78348 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASIC1P78348 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ASIC1P78348 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms