Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
GABREP78334 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.86□□□□□ -0.19
GABREP78334 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABREP78334 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
GABREP78334 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 OR2I1P-209ENST00000641730 5365 ntBASIC13.85□□□□□ -0.19
GABREP78334 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 BAK1P1-201ENST00000317045 636 ntBASIC13.85□□□□□ -0.19
GABREP78334 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.85□□□□□ -0.19
GABREP78334 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.85□□□□□ -0.19
GABREP78334 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 OR2R1P-201ENST00000441404 914 ntBASIC13.85□□□□□ -0.19
GABREP78334 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.85□□□□□ -0.19
GABREP78334 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 ALG1L6P-201ENST00000515248 758 ntBASIC13.85□□□□□ -0.19
GABREP78334 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.85□□□□□ -0.19
GABREP78334 CR383656.3-201ENST00000551315 183 ntBASIC13.85□□□□□ -0.19
GABREP78334 C2orf69P1-201ENST00000563532 1093 ntBASIC13.85□□□□□ -0.19
GABREP78334 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.85□□□□□ -0.19
GABREP78334 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 FO393412.1-201ENST00000619841 382 ntBASIC13.85□□□□□ -0.19
GABREP78334 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.85□□□□□ -0.19
GABREP78334 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.85□□□□□ -0.19
GABREP78334 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.85□□□□□ -0.19
GABREP78334 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABREP78334 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.84□□□□□ -0.19
GABREP78334 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.84□□□□□ -0.19
GABREP78334 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.84□□□□□ -0.19
GABREP78334 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.84□□□□□ -0.19
GABREP78334 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
GABREP78334 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
GABREP78334 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.84□□□□□ -0.19
GABREP78334 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.84□□□□□ -0.19
GABREP78334 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.84□□□□□ -0.19
GABREP78334 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.84□□□□□ -0.19
GABREP78334 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GABREP78334 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.84□□□□□ -0.19
GABREP78334 ALG1L13P-202ENST00000519320 584 ntBASIC13.84□□□□□ -0.19
GABREP78334 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GABREP78334 AC138701.2-201ENST00000553634 226 ntBASIC13.84□□□□□ -0.19
GABREP78334 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms