Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.23□□□□□ -0.13
YBX1P67809 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 CICP12-201ENST00000455801 843 ntBASIC14.23□□□□□ -0.13
YBX1P67809 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
YBX1P67809 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.23□□□□□ -0.13
YBX1P67809 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.23□□□□□ -0.13
YBX1P67809 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.23□□□□□ -0.13
YBX1P67809 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.23□□□□□ -0.13
YBX1P67809 AC103988.2-201ENST00000561804 725 ntBASIC14.23□□□□□ -0.13
YBX1P67809 AC005730.2-201ENST00000564549 1184 ntBASIC14.23□□□□□ -0.13
YBX1P67809 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 EEF1DP1-201ENST00000585891 896 ntBASIC14.23□□□□□ -0.13
YBX1P67809 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.23□□□□□ -0.13
YBX1P67809 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.23□□□□□ -0.13
YBX1P67809 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 SHC1P1-201ENST00000425230 1745 ntBASIC14.23□□□□□ -0.13
YBX1P67809 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 PPT1-213ENST00000641319 2388 ntBASIC14.23□□□□□ -0.13
YBX1P67809 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.22□□□□□ -0.13
YBX1P67809 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
YBX1P67809 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
YBX1P67809 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.22□□□□□ -0.13
YBX1P67809 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 AC015818.8-201ENST00000587907 1519 ntBASIC14.22□□□□□ -0.13
YBX1P67809 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 AC010141.1-201ENST00000411585 623 ntBASIC14.22□□□□□ -0.13
YBX1P67809 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.22□□□□□ -0.13
YBX1P67809 KLF2P1-201ENST00000447438 1042 ntBASIC14.22□□□□□ -0.13
YBX1P67809 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 ALG3P1-201ENST00000508806 1114 ntBASIC14.22□□□□□ -0.13
YBX1P67809 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.22□□□□□ -0.13
YBX1P67809 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.22□□□□□ -0.13
YBX1P67809 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.22□□□□□ -0.13
YBX1P67809 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.22□□□□□ -0.13
YBX1P67809 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 FAM90A12P-201ENST00000519497 2375 ntBASIC14.22□□□□□ -0.13
YBX1P67809 FAM90A24P-201ENST00000520792 2369 ntBASIC14.22□□□□□ -0.13
YBX1P67809 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
YBX1P67809 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.22□□□□□ -0.13
YBX1P67809 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
YBX1P67809 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.22□□□□□ -0.13
YBX1P67809 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YBX1P67809 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
YBX1P67809 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
YBX1P67809 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
YBX1P67809 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
YBX1P67809 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.21□□□□□ -0.13
YBX1P67809 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
YBX1P67809 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms