Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AC007952.5-201ENST00000572818 1486 ntBASIC15.78■□□□□ 0.12
SNRPFP62306 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SNRPFP62306 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRPFP62306 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SNRPFP62306 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.78■□□□□ 0.12
SNRPFP62306 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRPFP62306 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.78■□□□□ 0.12
SNRPFP62306 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.78■□□□□ 0.12
SNRPFP62306 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 ACTBP11-201ENST00000436287 1126 ntBASIC15.78■□□□□ 0.12
SNRPFP62306 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRPFP62306 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 MARK2P5-201ENST00000507649 634 ntBASIC15.78■□□□□ 0.12
SNRPFP62306 AC005740.2-201ENST00000511085 419 ntBASIC15.78■□□□□ 0.12
SNRPFP62306 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRPFP62306 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.78■□□□□ 0.12
SNRPFP62306 AC009779.1-201ENST00000551138 283 ntBASIC15.78■□□□□ 0.12
SNRPFP62306 AL512310.5-201ENST00000551999 515 ntBASIC15.78■□□□□ 0.12
SNRPFP62306 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.78■□□□□ 0.12
SNRPFP62306 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.78■□□□□ 0.12
SNRPFP62306 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.78■□□□□ 0.12
SNRPFP62306 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.78■□□□□ 0.12
SNRPFP62306 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.78■□□□□ 0.12
SNRPFP62306 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.78■□□□□ 0.12
SNRPFP62306 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRPFP62306 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.78■□□□□ 0.12
SNRPFP62306 AC097376.2-205ENST00000610159 5334 ntBASIC15.78■□□□□ 0.12
SNRPFP62306 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNRPFP62306 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.78■□□□□ 0.12
SNRPFP62306 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.78■□□□□ 0.12
SNRPFP62306 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.77■□□□□ 0.12
SNRPFP62306 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRPFP62306 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRPFP62306 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.77■□□□□ 0.12
SNRPFP62306 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRPFP62306 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
SNRPFP62306 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNRPFP62306 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRPFP62306 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.77■□□□□ 0.12
SNRPFP62306 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRPFP62306 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SNRPFP62306 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRPFP62306 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SNRPFP62306 CCT8L1P-201ENST00000465400 1674 ntBASIC15.77■□□□□ 0.12
SNRPFP62306 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SNRPFP62306 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRPFP62306 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SNRPFP62306 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNRPFP62306 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SNRPFP62306 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRPFP62306 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNRPFP62306 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRPFP62306 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRPFP62306 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.77■□□□□ 0.12
SNRPFP62306 AC104306.2-201ENST00000451877 341 ntBASIC15.77■□□□□ 0.12
SNRPFP62306 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRPFP62306 AC104073.2-201ENST00000453737 312 ntBASIC15.77■□□□□ 0.12
SNRPFP62306 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRPFP62306 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRPFP62306 AC013355.1-201ENST00000562625 723 ntBASIC15.77■□□□□ 0.12
SNRPFP62306 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
SNRPFP62306 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SNRPFP62306 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRPFP62306 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.77■□□□□ 0.11
SNRPFP62306 AC126755.1-201ENST00000525846 6405 ntBASIC15.77■□□□□ 0.11
SNRPFP62306 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.77■□□□□ 0.11
SNRPFP62306 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.77■□□□□ 0.11
SNRPFP62306 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRPFP62306 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.77■□□□□ 0.11
SNRPFP62306 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SNRPFP62306 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRPFP62306 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SNRPFP62306 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
SNRPFP62306 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRPFP62306 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.77■□□□□ 0.11
SNRPFP62306 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SNRPFP62306 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRPFP62306 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNRPFP62306 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRPFP62306 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRPFP62306 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRPFP62306 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNRPFP62306 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRPFP62306 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRPFP62306 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRPFP62306 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRPFP62306 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms